Tag: Biological NMR

  • Altering a protein’s conformational space differentially regulates the host signalling pathway

    Apurva phale – @ApurvaPhale

    Viruses mimic host proteins to evade their immune response. A few baculoviruses do this by mimicking a widely present protein, ubiquitin. Interestingly, this viral protein can differentially regulate the forward and reverse pathways, not by changing the interaction interface but by modulating the protein’s conformational space as observed by eCPMG-NMR.

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  • Study of phosphorus clusters in tau fragment fibrils via multiple quantum solid-state NMR under DNP

    Lokeswara Rao – @lokeswarnmr

    Hyperphosphorylation of the protein tau is a characteristic of neurodegenerative diseases, yet its role is not entirely clear in promoting the tau aggregation propensity. Multiple quantum spin counting experiments were carried out to probe the phosphate species clustering and beta-sheet organization in the fibrils of phosphorylated tau fragments.

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  • Yesterday’s Software for Tomorrow’s Solutions!

    Simon P. Skinner – @nmronline

    Host-guest interactions in MOFs are key to their performance in various applications. Solid-state NMR can probe these interactions, however, with limited sensitivity. I will demonstrate how endogenous metal-ion DNP can tackle this challenge, keeping MOF pores empty for guests, and discuss the effect of MOFs mobility and molecular O2 on the DNP efficacy.

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  • Probing the dynamics of YadA autotransporter in microcrystals and outer membranes hints at requirements for beta-barrel membrane insertion

    Jayasubba Reddy Yarava – @JYarava

    Most types of cells are protected and functionalized by a dense surface layer of glycans, proteoglycans, and glycolipids. This surface represents an under-explored space in structural biology that is almost impossible to recreate in vitro. Here, a realistic picture of YadA dynamics in asymmetric outer membrane environment was investigated using ssNMR and MD simulations.

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  • Structural Elucidation and Remodeling of Fungal Cell Wall by Solid-state NMR

    Isha Gautam

    Understanding cell wall architecture and adaptation mechanism is essential for antifungal drug efficacies. The cell wall of Aspergillus fumigatus is characterized using solid-state NMR (ssNMR) divulged rigid core of chitin, β-1,3-glucan and α-1,3-glucan. Mobile domains contain galactoproteins and α-1,3-glucan. Hydrophobic and stiff cell walls were exploited in response to antifungals.

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  • Imaging and spectroscopic applications in cancer research

    Madhu Basetti – @mbasetti

    We are an imaging core group working in cancer research with preclinical imaging modalities for early detection and prognosis of cancer.

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  • Nuclear Magnetic Resonance spectroscopy technique for Identification of Designer Drugs

    Annwesha Mazumdar – @Annwesha9

    It’s a challenging task to detect the metabolites of designer drugs in the body. NMR spectroscopy is one of the validating techniques for its utility of metabolic fingerprinting of various designer drugs and has opened a new horizon in forensics. This paper highlights the recent developments of Nuclear Magnetic Resonance spectroscopy applied for the Forensic identification of various designer drugs.

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  • Chemical Shift Imaging NMR for Probing Bacterial-Mammalian Crosstalk in the Human Large Intestine

    Trey Koev – @TTKoev

    Chemical shift imaging NMR allows us to exploit a naturally occurring gradient of commensal bacteria, mucosa and large intestinal colonocytes. Probing the metabolic crosstalk between bacteria and colonocytes in healthy and diseases (cancer) cell set-ups allows us to probe differences in the cell-cell communication on a molecular level, potentially enabling the development of novel treatment avenues for colorectal pathologies.

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  • Solid-state NMR revealed peculiar phosphonate in velvet worm slime

    Alexandre Poulhazan – @AlexPoulhazan

    Velvet worms are fascinating animals that have a peculiar way to hunt. They eject a translucent liquid, the slime, that quickly forms sticky fibers trapping their preys. In addition to exciting recyclability of this natural glue, this slime has been characterized here by MAS-DNP and NMR, detecting unprecedented phosphonate-rich molecules.

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  • The power of 19F-NMR: peptide-membrane binding is not that basic!

    Tran Thanh Tam Pham – @tammyphamily

    My research focuses on a hormone, Apelin, important in forming new blood vessels and progressing chronic illnesses. It is not uncommon for peptides like Apelin to bind membrane before receptor-binding. Using 19F-Nuclear Magnetic Resonance, I characterize this binding suggesting a mechanism for Apelin that highlights membrane role in therapeutic delivery.

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